zbio.net - main page Zbio.net > Calculations > Sequence tools > Codon frequencies Rambler's Top100  Russian version
MAIN PAGE · PROJECT · PROTOCOLS · PROGRAMS · LITERATURE · WEB · COMPANIES · MARKETPLACE · CLASSIFIED · FORUMS ·

Rare Codons' Search

 

    Name (not necessary):  
    Nucleotide sequence in the proper reading frame
    (case insensitiv, disregarded all letters except: aAgGcCtTuU):

    lowercase
    uppercase
    U       T

    Critical frequency (per 1000):  
    Organism:  
       
     
    Detailed results:

     

    This program helps to find rare codons in the coding region. Rare codons may induce problems when protein should be expressed in heterologous organism. Codon frequencies were taken from "Codon-Usage Database" that contains 392,382 CDS's from 11,713 organisms.

    It is also possible to use the form for translation of nucleic acids. But more convenient is "6 Frame Translation". For manipulations with nucleic acid sequence (reverse, reverse/complement, double stranded) it is possible to use "Sequence Utilities" program.



Zbio.net: http://zbio.net
e-mail: editor@zbio.net
seen: 16541

    Supplement





       


See also:
/web-links/
Last modification: 30/07/13

MAIN PAGE · PROJECT · PROTOCOLS · PROGRAMS · LITERATURE · WEB · COMPANIES · MARKETPLACE · CLASSIFIED · FORUMS ·

 ·  Викимарт - все интернет-магазины в одном месте  ·  Доска объявлений Board.com.ua  · 
--- сервер арендован в компании Hetzner Online, Германия ---
--- администрирование сервера: Intervipnet ---

zbio.net  ·  editor@zbio.net  ·  advertizing

molbiol.ru - методы, информация и программы для молекулярных биологов   Rambler