Пожалуйста подскажите, что значат следующие термины:
1)complete cds 2)GSS 3)STT 4)dbGaP 5)GENSAT
Заранее огромное спасибо!
e.coli, 13.10.2009 15:36
1)complete cds
"CDS coding region, coding sequence. CDS refers to the portion of a genomic DNA sequence that is translated, from the start codon to the stop codon, inclusively, if complete. A partial CDS lacks part of the complete CDS (it may lack either or both the start and stop codons). Successful translation of a CDS results in the synthesis of a protein."
2)GSS
"GSS Genome Survey Sequences are analogous to ESTs except that the sequences are genomic in origin, rather than cDNA (mRNA). The GSS division of GenBank contains (but is not limited to) the following types of data: random “single-pass read” genome survey sequences, cosmid/BAC/YAC end sequences, exon-trapped genomic sequences, and Alu -PCR sequences."
3)STT
Hе знаю. Если это STS то "STS A short DNA segment that occurs only once in the human genome, the exact location and order of bases of which are known. Because each is unique, STSs are helpful for chromosome placement of mapping and sequencing data from many different laboratories. STSs serve as landmarks on the physical map of the human genome."
4)dbGaP
Не знаю. Похоже база данных протеинов и генов. Не уверен. Узнал: ""
5)GENSAT
Не знаю. Узнал: "About The GENSAT project at Rockefeller University
The GENSAT project aims to map the expression of genes in the central nervous system of the mouse, using both in situ hybridization and transgenic mouse techniques. It is a collection of pictorial gene expression maps of the brain and spinal cord of the mouse. Using EGFP BAC-transgenics, this project provides the scientific community with tools to catalog, map, and electrophysiologically record from individual cells. Our application of Cre recombinase technologies allows for cell-specific gene manipulation. The transgenic mice created by this project are available to the scientific community."
Вот NCBI. Там же handbook.
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